HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.4AG0003050
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr4A 3192429 3204998 - CQ.Regalona.r1.4AG0003050
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.10 244,012.72 Da 39.29 104.10 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 827 1097 6.3E-45 IPR000719
Pfam PF08263 Leucine rich repeat N-terminal domain 1169 1208 2.2E-7 IPR013210
Pfam PF08263 Leucine rich repeat N-terminal domain 27 66 1.3E-6 IPR013210
Pfam PF00069 Protein kinase domain 1942 2211 2.9E-44 IPR000719
SUPERFAMILY SSF52058 L domain-like 1190 1536 1.12E-54 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 810 1099 6.2E-72 IPR011009
SUPERFAMILY SSF52058 L domain-like 1494 1837 3.16E-57 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1922 2213 5.13E-70 IPR011009
SUPERFAMILY SSF52058 L domain-like 49 395 9.01E-63 -
SUPERFAMILY SSF52047 RNI-like 377 732 2.75E-60 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 2014 2222 3.0E-56 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 900 1110 5.4E-58 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 786 899 6.6E-19 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1899 2013 1.5E-17 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 500 748 1.5E-58 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1729 1853 3.5E-26 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1617 1728 1.7E-30 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1544 1616 9.6E-16 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1170 1273 4.5E-21 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 188 257 5.8E-17 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1373 1543 2.9E-46 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 258 499 6.2E-66 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 26 187 7.7E-48 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1274 1372 2.1E-26 IPR032675
SMART SM00365 LRR_sd22_2 1328 1354 640.0 -
SMART SM00365 LRR_sd22_2 1473 1502 230.0 -
SMART SM00365 LRR_sd22_2 1425 1448 710.0 -
SMART SM00369 LRR_typ_2 1737 1761 170.0 IPR003591
SMART SM00369 LRR_typ_2 478 500 360.0 IPR003591
SMART SM00365 LRR_sd22_2 670 692 130.0 -
SMART SM00365 LRR_sd22_2 236 266 250.0 -
SMART SM00365 LRR_sd22_2 596 628 650.0 -
SMART SM00220 serkin_6 1937 2220 1.2E-30 IPR000719
SMART SM00220 serkin_6 823 1106 1.7E-34 IPR000719
SMART SM00369 LRR_typ_2 670 693 29.0 IPR003591
SMART SM00365 LRR_sd22_2 92 113 35.0 -
SMART SM00365 LRR_sd22_2 1617 1640 630.0 -
SMART SM00369 LRR_typ_2 165 188 300.0 IPR003591
SMART SM00365 LRR_sd22_2 309 328 810.0 -
SMART SM00369 LRR_typ_2 1521 1545 200.0 IPR003591
SMART SM00369 LRR_typ_2 620 644 29.0 IPR003591
SMART SM00369 LRR_typ_2 1352 1376 60.0 IPR003591
SMART SM00369 LRR_typ_2 1425 1449 72.0 IPR003591
SMART SM00369 LRR_typ_2 1787 1810 47.0 IPR003591
SMART SM00369 LRR_typ_2 92 116 4.5 IPR003591
SMART SM00369 LRR_typ_2 1280 1304 46.0 IPR003591
SMART SM00369 LRR_typ_2 236 263 86.0 IPR003591
SMART SM00369 LRR_typ_2 357 381 61.0 IPR003591
SMART SM00369 LRR_typ_2 140 164 76.0 IPR003591
SMART SM00369 LRR_typ_2 309 333 28.0 IPR003591
SMART SM00369 LRR_typ_2 454 477 270.0 IPR003591
SMART SM00369 LRR_typ_2 1473 1497 46.0 IPR003591
ProSiteProfiles PS50011 Protein kinase domain profile. 823 1106 36.866432 IPR000719
ProSiteProfiles PS51450 Leucine-rich repeat profile. 672 694 7.796663 IPR001611
ProSiteProfiles PS50011 Protein kinase domain profile. 1937 2222 36.145599 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 945 957 - IPR008271
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 2059 2071 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 829 852 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1943 1966 - IPR017441
PRINTS PR00019 Leucine-rich repeat signature 599 612 6.8E-5 -
PRINTS PR00019 Leucine-rich repeat signature 670 683 6.8E-5 -
MobiDBLite mobidb-lite consensus disorder prediction 2200 2222 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G73080.1 PEP1 receptor 1. Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. 0
RefSeq XP_021772294.1 receptor-like protein kinase [Chenopodium quinoa] 0
Swiss-Prot P93194 Receptor-like protein kinase OS=Ipomoea nil OX=35883 GN=INRPK1 PE=2 SV=2 0
TrEMBL A0A803KMM3 Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 1 Ah005162
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.4AG0003050, CQ.Regalona.r1.4BG0003210
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