Basic Information
Locus ID:
CQ.Regalona.r1.4AG0000550
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 632643 | 641484 | + | CQ.Regalona.r1.4AG0000550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 81,301.23 Da | 44.58 | 72.01 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 162 | 434 | 3.1798E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 162 | 446 | 3.3E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 162 | 442 | 8.75E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 133 | 441 | 2.9E-81 | - |
| SMART | SM00220 | serkin_6 | 162 | 457 | 6.7E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 162 | 444 | 23.637007 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 168 | 197 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 285 | 297 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 127 | - | - |
| Coils | Coil | Coil | 102 | 127 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021771966.1 | casein kinase 1-like protein HD16 [Chenopodium quinoa] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KLY0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology