Basic Information
Locus ID:
CQ.Regalona.r1.4AG0000510
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 604283 | 609297 | - | CQ.Regalona.r1.4AG0000510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 99,616.66 Da | 37.55 | 86.43 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 577 | 850 | 1.22854E-92 | - |
| Pfam | PF13855 | Leucine rich repeat | 110 | 142 | 2.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 58 | 3.6E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 380 | 421 | 2.7E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 320 | 358 | 0.58 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 574 | 842 | 9.8E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 549 | 847 | 2.7E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 311 | 4.76E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 322 | 430 | 5.53E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 319 | 3.1E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 649 | 872 | 4.6E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 536 | 648 | 9.5E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 446 | 2.1E-30 | IPR032675 |
| SMART | SM00220 | serkin_6 | 571 | 851 | 4.1E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 181 | 204 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 384 | 408 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 131 | 152 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 130 | 0.0011 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 386 | 409 | 7.396226 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 571 | 851 | 40.682613 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 696 | 708 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 577 | 599 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 408 | 421 | 9.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 387 | 400 | 9.8E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 919 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 908 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 463 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021771964.1 | receptor-like kinase TMK4 [Chenopodium quinoa] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KLX7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology