Basic Information
Locus ID:
CQ.Regalona.r1.4AG0000270
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 448830 | 460297 | + | CQ.Regalona.r1.4AG0000270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 53,612.07 Da | 41.02 | 80.53 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 26 | 345 | 5.7E-74 | IPR000490 |
| Pfam | PF07983 | X8 domain | 361 | 432 | 6.3E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 26 | 346 | 1.78E-77 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 453 | 1.6E-8 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 25 | 353 | 5.6E-110 | - |
| SMART | SM00768 | X8_cls | 360 | 445 | 2.2E-44 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021771931.1 | glucan endo-1,3-beta-glucosidase 4-like [Chenopodium quinoa] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KLV4 | RRM domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology