Basic Information
Locus ID:
CQ.Regalona.r1.3BG0016050
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 40176427 | 40181025 | - | CQ.Regalona.r1.3BG0016050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 53,959.69 Da | 45.28 | 84.46 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 164 | 371 | 4.6E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 142 | 427 | 1.35E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 239 | 448 | 2.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 132 | 235 | 4.2E-24 | - |
| SMART | SM00220 | serkin_6 | 162 | 414 | 1.1E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 162 | 436 | 34.237507 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 168 | 190 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 281 | 293 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 91 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021750504.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Chenopodium quinoa] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QVA5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_137550 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology