halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.3BG0006290

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3B	6621055	6623162	+	CQ.Regalona.r1.3BG0006290

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.88	66,322.15 Da	44.40	100.03	0.01

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	14	102	2.09E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	10	61	1.2E-7	-
SMART	SM00256	fbox_2	17	57	0.0023	IPR001810
SMART	SM00256	fbox_2	395	435	15.0	IPR001810
Coils	Coil	Coil	575	578	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021775072.1	uncharacterized protein LOC110738920 [Chenopodium quinoa]	0
TrEMBL	A0A803MUW4	F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah030303
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.3AG0006150, CQ.Regalona.r1.3BG0006280 ... CQ.Regalona.r1.3BG0006290