Basic Information
Locus ID:
CQ.Regalona.r1.3BG0004810
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 5257827 | 5261893 | - | CQ.Regalona.r1.3BG0004810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 56,186.56 Da | 51.42 | 75.27 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 220 | 289 | 5.5E-18 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 8 | 65 | 7.3E-13 | IPR025287 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 497 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46495.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021729157.1 | putative RING-H2 finger protein ATL21A [Chenopodium quinoa] | 0 |
| P0CH01 | Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1 | 0 | |
| TrEMBL | A0A803L2N6 | GUB_WAK_bind domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology