Basic Information
Locus ID:
CQ.Regalona.r1.3BG0000980
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Oxidation resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 1162811 | 1167378 | - | CQ.Regalona.r1.3BG0000980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 35,889.15 Da | 52.98 | 73.60 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 168 | 305 | 2.6E-30 | IPR006571 |
| SMART | SM00584 | 109ultra | 142 | 306 | 7.8E-31 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 143 | 306 | 25.078213 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 35 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05590.2 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_021725641.1 | oxidation resistance protein 1-like [Chenopodium quinoa] | 0 |
| A8KBE0 | Oxidation resistance protein 1 OS=Xenopus tropicalis OX=8364 GN=oxr1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803MTU3 | TLDc domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology