Basic Information
Locus ID:
CQ.Regalona.r1.3BG0000820
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine protein kinase IRE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 1045834 | 1055099 | + | CQ.Regalona.r1.3BG0000820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 129,580.64 Da | 46.29 | 76.71 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 881 | 1033 | 2.3E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 848 | 1065 | 3.48E-37 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1052 | 1061 | 8.6E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 926 | 1051 | 8.6E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 776 | 886 | 5.8E-13 | - |
| SMART | SM00220 | serkin_6 | 853 | 1033 | 4.0E-14 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 647 | 1033 | 21.262495 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1034 | 1139 | 8.920801 | IPR000961 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 631 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 817 | 843 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 631 | 652 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 207 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_021725760.1 | probable serine/threonine protein kinase IRE [Chenopodium quinoa] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MTV8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology