Basic Information
Locus ID:
CQ.Regalona.r1.3AG0010420
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
strictosidine synthase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 11501669 | 11505728 | - | CQ.Regalona.r1.3AG0010420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.82 | 20,375.49 Da | 65.18 | 51.98 | -1.18 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021747566.1 | basic-leucine zipper transcription factor A-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9R9P1 | Retrotrans_gag domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_091050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 2 | BVRB_4g086710, BVRB_8g189320 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg25647, Sbi_jg35810 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg1509, Seu_jg7247 |
| Amaranthaceae | Suaeda glauca | 30 | Sgl05059, Sgl08276, Sgl09509, Sgl10099, Sgl13129, Sgl14136 ... |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000052022 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3AG0010420 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb5G26473, Lb8G36574 |