Basic Information
Locus ID:
CQ.Regalona.r1.3AG0010140
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 11164635 | 11166644 | + | CQ.Regalona.r1.3AG0010140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 36,301.10 Da | 35.35 | 87.45 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 189 | 330 | 1.29644E-67 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 173 | 6.11209E-70 | - |
| Pfam | PF00190 | Cupin | 185 | 313 | 9.3E-17 | IPR006045 |
| Pfam | PF00190 | Cupin | 11 | 155 | 4.0E-28 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 16 | 322 | 2.55E-43 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 186 | 7.0E-33 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 187 | 333 | 1.1E-42 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 3.6E-31 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 175 | 316 | 6.1E-17 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 197 | 217 | 2.0E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 244 | 260 | 2.0E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 262 | 277 | 2.0E-8 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021774642.1 | 11S globulin seed storage protein 2-like [Chenopodium quinoa] | 0 |
| P07728 | Glutelin type-A 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803M5Y3 | 11-S seed storage protein, plant OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology