Basic Information
Locus ID:
CQ.Regalona.r1.3AG0009610
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 10452960 | 10456021 | + | CQ.Regalona.r1.3AG0009610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 61,964.93 Da | 43.66 | 80.79 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 375 | 435 | 2.15188E-14 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 69 | 327 | 1.22513E-136 | - |
| Pfam | PF13833 | EF-hand domain pair | 388 | 435 | 2.0E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 446 | 511 | 5.8E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 70 | 328 | 4.0E-75 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 368 | 512 | 5.13E-40 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 341 | 3.64E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 337 | 514 | 1.3E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 156 | 336 | 4.2E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 72 | 155 | 8.7E-30 | - |
| SMART | SM00220 | serkin_6 | 70 | 328 | 3.8E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 447 | 475 | 0.0037 | IPR002048 |
| SMART | SM00054 | efh_1 | 375 | 403 | 6.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 411 | 439 | 2.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 486 | 514 | 5.1E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 371 | 406 | 14.876045 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 407 | 442 | 8.404312 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 443 | 478 | 13.341799 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 482 | 517 | 12.644413 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 70 | 328 | 49.007538 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 384 | 396 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 420 | 432 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 76 | 99 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 190 | 202 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 495 | 507 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 456 | 468 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 50 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021751845.1 | calcium-dependent protein kinase 24-like [Chenopodium quinoa] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KTC5 | Calcium-dependent protein kinase 24 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology