Basic Information
Locus ID:
CQ.Regalona.r1.3AG0008940
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 9672643 | 9677490 | + | CQ.Regalona.r1.3AG0008940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 113,764.22 Da | 32.65 | 101.12 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 728 | 997 | 1.0E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 88 | 2.2E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 285 | 345 | 3.8E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 262 | 284 | 0.038 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 728 | 1000 | 8.63E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 97 | 441 | 9.02E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 382 | 635 | 2.79E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 804 | 1017 | 5.8E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 254 | 352 | 1.9E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 723 | 803 | 9.0E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 169 | 1.0E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 353 | 647 | 2.8E-78 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 170 | 253 | 1.9E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 308 | 332 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 140 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 260 | 284 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 452 | 476 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 212 | 236 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 356 | 380 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 571 | 594 | 150.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 725 | 1004 | 3.5E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 381 | 404 | 360.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 310 | 333 | 7.041994 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 725 | 1012 | 38.251564 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 851 | 863 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 731 | 754 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021752360.1 | leucine-rich repeat receptor-like protein kinase TDR [Chenopodium quinoa] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KT63 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology