Basic Information
Locus ID:
CQ.Regalona.r1.3AG0003930
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 4271097 | 4277477 | - | CQ.Regalona.r1.3AG0003930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 92,134.76 Da | 39.73 | 87.35 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 549 | 682 | 1.22278E-23 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 551 | 681 | 4.4E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 703 | 745 | 1.6E-11 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 509 | 746 | 3.26E-58 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 683 | 763 | 7.5E-94 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 510 | 765 | 7.5E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 547 | 684 | 1.1E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 654 | 673 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 781 | - | - |
| Coils | Coil | Coil | 734 | 776 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_021726767.1 | calmodulin-interacting protein 111-like [Chenopodium quinoa] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A803MKW0 | AAA domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology