Basic Information
Locus ID:
CQ.Regalona.r1.3AG0000490
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 558313 | 567865 | - | CQ.Regalona.r1.3AG0000490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 85,652.15 Da | 49.55 | 75.35 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 502 | 748 | 1.68833E-127 | - |
| CDD | cd00130 | PAS | 132 | 233 | 7.21092E-14 | IPR000014 |
| Pfam | PF00989 | PAS fold | 127 | 231 | 3.7E-14 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 496 | 748 | 6.5E-69 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 126 | 230 | 2.62E-21 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 482 | 747 | 1.15E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 132 | 236 | 6.9E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 771 | 1.0E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 489 | 573 | 3.5E-31 | - |
| SMART | SM00220 | serkin_6 | 496 | 756 | 7.9E-62 | IPR000719 |
| SMART | SM00091 | pas_2 | 123 | 189 | 1.2E-7 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 127 | 233 | 6.9E-15 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 496 | 756 | 44.103039 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 121 | 192 | 14.256015 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 615 | 627 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 675 | 697 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 656 | 666 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 719 | 741 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 570 | 583 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 609 | 627 | 1.9E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 379 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06620.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021730341.1 | tyrosine-protein kinase receptor UFO-like [Chenopodium quinoa] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N2C5 | PAS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology