Basic Information
Locus ID:
CQ.Regalona.r1.3AG0000210
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
CSC1-like protein RXW8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 270208 | 284901 | + | CQ.Regalona.r1.3AG0000210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 86,633.35 Da | 53.41 | 102.10 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 363 | 631 | 4.0E-67 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 240 | 6.5E-8 | IPR027815 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 165 | 5.4E-38 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 306 | 352 | 1.3E-11 | IPR027815 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 761 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 754 | - | - |
| Coils | Coil | Coil | 676 | 696 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_021730372.1 | CSC1-like protein RXW8 isoform X1 [Chenopodium quinoa] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N2A2 | CSC1-like protein RXW8 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology