Basic Information
Locus ID:
CQ.Regalona.r1.2BG0028470
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the glycosyltransferase 31 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 84552816 | 84563008 | + | CQ.Regalona.r1.2BG0028470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 98,510.36 Da | 46.60 | 71.22 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01762 | Galactosyltransferase | 140 | 336 | 5.4E-46 | IPR002659 |
| Pfam | PF02204 | Vacuolar sorting protein 9 (VPS9) domain | 502 | 605 | 4.5E-32 | IPR003123 |
| Pfam | PF18151 | Domain of unknown function (DUF5601) | 396 | 455 | 7.6E-15 | IPR041545 |
| Pfam | PF13334 | Domain of unknown function (DUF4094) | 11 | 103 | 4.5E-31 | IPR025298 |
| SUPERFAMILY | SSF109993 | VPS9 domain | 383 | 621 | 8.89E-64 | IPR037191 |
| Gene3D | G3DSA:1.20.1050.80 | VPS9 domain | 463 | 629 | 5.5E-66 | IPR037191 |
| Gene3D | G3DSA:3.90.550.50 | - | 117 | 342 | 8.1E-16 | - |
| Gene3D | G3DSA:1.10.246.120 | - | 392 | 461 | 4.4E-21 | - |
| SMART | SM00167 | vps9_2 | 499 | 618 | 5.4E-33 | IPR003123 |
| ProSiteProfiles | PS51205 | VPS9 domain profile. | 466 | 610 | 43.657413 | IPR003123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 863 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 875 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77810.2 | Galactosyltransferase family protein. | 0 |
| RefSeq | XP_021748231.1 | beta-1,3-galactosyltransferase 7-like isoform X2 [Chenopodium quinoa] | 0 |
| Q6NQB7 | Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=B3GALT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3HRB1 | Glycosyl transferase, family 31 OS=Corchorus capsularis OX=210143 GN=CCACVL1_17574 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology