Basic Information
Locus ID:
CQ.Regalona.r1.2BG0027210
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 83232340 | 83234866 | - | CQ.Regalona.r1.2BG0027210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 83,843.57 Da | 45.38 | 84.43 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 467 | 747 | 1.03341E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 462 | 742 | 3.2E-40 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 115 | 300 | 3.4E-18 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 439 | 745 | 1.07E-71 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 73 | 308 | 8.5E-18 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 429 | 546 | 5.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 547 | 755 | 5.5E-51 | - |
| SMART | SM00220 | serkin_6 | 461 | 745 | 1.7E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 758 | 36.442413 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 467 | 489 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 593 | 605 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_021748016.1 | serine/threonine-protein kinase-like protein CCR4 [Chenopodium quinoa] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KZX7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology