Basic Information
Locus ID:
CQ.Regalona.r1.2BG0023960
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 79677846 | 79684409 | - | CQ.Regalona.r1.2BG0023960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 78,425.00 Da | 43.52 | 83.28 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 373 | 671 | 3.91519E-124 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 342 | 658 | 2.0E-96 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 373 | 681 | 2.28E-70 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 375 | 675 | 8.2E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 152 | - | - |
| Coils | Coil | Coil | 304 | 331 | - | - |
| Coils | Coil | Coil | 245 | 272 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_021748866.1 | polygalacturonate 4-alpha-galacturonosyltransferase-like [Chenopodium quinoa] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KZ11 | Hexosyltransferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology