Basic Information
Locus ID:
CQ.Regalona.r1.2BG0021110
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 76943269 | 76946583 | + | CQ.Regalona.r1.2BG0021110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 61,149.73 Da | 39.68 | 97.27 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 52 | 3.01E-10 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 149 | 361 | 7.82E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 118 | 375 | 3.0E-15 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 49 | 2.3E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 45 | 9.25902 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59000.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021755135.1 | putative F-box/LRR-repeat protein At5g02700 [Chenopodium quinoa] | 0 |
| Q2V3N5 | F-box protein At3g59000 OS=Arabidopsis thaliana OX=3702 GN=At3g59000 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803M4E4 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology