Basic Information
Locus ID:
CQ.Regalona.r1.2BG0021100
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 76938837 | 76942067 | + | CQ.Regalona.r1.2BG0021100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 65,821.03 Da | 34.34 | 100.55 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 42 | 3.2E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 153 | 340 | 4.63E-12 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 57 | 5.23E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 92 | 414 | 7.3E-12 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 48 | 4.3E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 42 | 10.080346 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59000.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021755132.1 | F-box protein At5g03100-like isoform X2 [Chenopodium quinoa] | 0 |
| Q1PED9 | F-box/LRR-repeat protein At3g59190 OS=Arabidopsis thaliana OX=3702 GN=At3g59190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M4E3 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology