Basic Information
Locus ID:
CQ.Regalona.r1.2BG0021080
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 76931969 | 76935820 | + | CQ.Regalona.r1.2BG0021080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 67,205.90 Da | 37.22 | 105.71 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 21 | 57 | 2.7E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 143 | 397 | 8.63E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 68 | 2.75E-12 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 244 | 493 | 1.3E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 59 | 2.3E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 19 | 55 | 9.417986 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59190.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021755129.1 | F-box/FBD/LRR-repeat protein At5g56420-like [Chenopodium quinoa] | 0 |
| Q1PED9 | F-box/LRR-repeat protein At3g59190 OS=Arabidopsis thaliana OX=3702 GN=At3g59190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M4E2 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology