Basic Information
Locus ID:
CQ.Regalona.r1.2BG0019960
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 75823316 | 75828472 | + | CQ.Regalona.r1.2BG0019960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 97,173.66 Da | 39.91 | 86.10 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 569 | 853 | 3.65186E-86 | - |
| Pfam | PF12819 | Malectin-like domain | 47 | 450 | 5.3E-35 | IPR024788 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 568 | 850 | 4.1E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 536 | 854 | 1.62E-73 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 41 | 212 | 3.2E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 534 | 642 | 2.8E-29 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 259 | 451 | 1.9E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 643 | 874 | 1.9E-53 | - |
| SMART | SM00220 | serkin_6 | 563 | 855 | 3.0E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 563 | 854 | 34.435383 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 569 | 595 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 699 | 711 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021739425.1 | receptor-like protein kinase FERONIA [Chenopodium quinoa] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LCB4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035594 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl62650, Sgl67211, Sgl67272 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.2BG0019900, CQ.Regalona.r1.2BG0019920 ... |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG03.512 |