Basic Information
Locus ID:
CQ.Regalona.r1.2BG0017160
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 72578458 | 72582160 | - | CQ.Regalona.r1.2BG0017160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 113,901.65 Da | 36.91 | 98.88 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 4.4E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 692 | 974 | 6.3E-48 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 119 | 141 | 0.43 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 525 | 562 | 2.3E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 202 | 8.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 288 | 595 | 3.61E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 976 | 3.24E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 379 | 9.07E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 993 | 1.5E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 349 | 456 | 1.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 674 | 770 | 6.3E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 348 | 1.7E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 186 | 7.1E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 457 | 637 | 8.8E-40 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 38.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 691 | 982 | 5.9E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 7.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 430 | 454 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 573 | 5.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 140.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 93 | 112 | 34.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 477 | 506 | 740.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 572 | 595 | 810.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 239 | 262 | 180.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 263 | 289 | 0.094 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 527 | 549 | 7.21911 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 982 | 38.746254 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 827 | 839 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 720 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739110.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology