Basic Information
Locus ID:
CQ.Regalona.r1.2BG0017150
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 72560944 | 72564845 | - | CQ.Regalona.r1.2BG0017150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 113,118.99 Da | 36.94 | 103.22 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 692 | 973 | 9.12282E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 67 | 3.1E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 688 | 969 | 8.3E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 203 | 2.3E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 217 | 239 | 1.3 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 288 | 346 | 2.1E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 972 | 9.98E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 381 | 1.26E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 327 | 649 | 2.21E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 144 | 1.2E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 455 | 632 | 2.4E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 670 | 765 | 7.5E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 207 | 454 | 1.7E-69 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 978 | 8.4E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 145 | 206 | 5.4E-16 | IPR032675 |
| SMART | SM00220 | serkin_6 | 686 | 975 | 2.8E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 288 | 309 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 310 | 333 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 4.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 8.5 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 241 | 263 | 7.581043 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 977 | 38.392902 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 526 | 548 | 7.257614 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 715 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739111.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology