Basic Information
Locus ID:
CQ.Regalona.r1.2BG0017130
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 72548920 | 72556667 | - | CQ.Regalona.r1.2BG0017130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 95,929.76 Da | 39.51 | 106.47 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 408 | 430 | 1.6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 531 | 552 | 0.41 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 456 | 515 | 3.9E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 203 | 2.3E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 289 | 347 | 2.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 643 | 836 | 7.2E-32 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 67 | 1.4E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 627 | 834 | 5.93E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 288 | 586 | 5.44E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 287 | 1.5E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 145 | 220 | 5.0E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 625 | 847 | 2.1E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 221 | 288 | 1.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 581 | 8.9E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 144 | 2.5E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 6.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 502 | 526 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 529 | 557 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 454 | 478 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 216 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 118 | 99.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 240 | 263 | 470.0 | - |
| SMART | SM00220 | serkin_6 | 641 | 861 | 9.1E-10 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 311 | 335 | 50.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 94 | 113 | 43.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 264 | 290 | 16.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 641 | 861 | 28.894855 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 647 | 670 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 784 | 796 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 502 | 515 | 3.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 290 | 303 | 3.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739112.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology