Basic Information
Locus ID:
CQ.Regalona.r1.2BG0016000
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 70758993 | 70768808 | + | CQ.Regalona.r1.2BG0016000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 63,231.18 Da | 29.46 | 91.80 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 33 | 77 | 4.22404E-4 | IPR018392 |
| Pfam | PF01476 | LysM domain | 95 | 131 | 0.0035 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 298 | 552 | 1.6E-37 | IPR001245 |
| Pfam | PF01476 | LysM domain | 34 | 78 | 0.0014 | IPR018392 |
| SUPERFAMILY | SSF54106 | LysM domain | 33 | 78 | 9.16E-6 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 554 | 4.72E-71 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 27 | 84 | 1.2E-8 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 570 | 7.2E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 356 | 8.9E-17 | - |
| SMART | SM00257 | LysM_2 | 94 | 141 | 16.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 33 | 78 | 4.2E-5 | IPR018392 |
| SMART | SM00257 | LysM_2 | 158 | 200 | 7.0 | IPR018392 |
| SMART | SM00220 | serkin_6 | 296 | 556 | 2.7E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 296 | 574 | 31.198698 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 32 | 77 | 10.211378 | IPR018392 |
| ProSitePatterns | PS00430 | TonB-dependent receptor proteins signature 1. | 1 | 47 | - | IPR010916 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 401 | 413 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 302 | 324 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021738959.1 | chitin elicitor receptor kinase 1-like isoform X1 [Chenopodium quinoa] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LB77 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology