Basic Information
Locus ID:
CQ.Regalona.r1.2BG0015990
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 70740167 | 70751592 | + | CQ.Regalona.r1.2BG0015990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 83,670.82 Da | 43.13 | 76.17 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 9 | 89 | 1.01635E-32 | - |
| Pfam | PF00069 | Protein kinase domain | 409 | 662 | 2.9E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 665 | 9.04E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 679 | 8.3E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 361 | 478 | 2.4E-25 | - |
| SMART | SM00220 | serkin_6 | 406 | 670 | 2.6E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 406 | 670 | 34.604992 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 524 | 536 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 688 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 741 | - | - |
| Coils | Coil | Coil | 339 | 387 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021738951.1 | U-box domain-containing protein 52-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LB75 | RRM domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology