Basic Information
Locus ID:
CQ.Regalona.r1.2BG0015320
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Protein of unknown function (DUF1644)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 69808869 | 69813732 | + | CQ.Regalona.r1.2BG0015320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 40,938.83 Da | 60.32 | 62.12 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07800 | Protein of unknown function (DUF1644) | 42 | 202 | 1.0E-65 | IPR012866 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 24 | 179 | 2.5E-7 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 287 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31410.1 | Protein of unknown function (DUF1644). | 0 |
| RefSeq | XP_021738875.1 | uncharacterized protein LOC110705346 isoform X1 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LB09 | DUF1644 family protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg23693, jg36863, jg7784 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_13103 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034379 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g034730 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg20485, Sbi_jg23289 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17086 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009125 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl63544, Sgl68033, Sgl68035 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000017589, gene:ENSEOMG00000049991 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0013350, CQ.Regalona.r1.2BG0015320 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30251960 |
| Apiaceae | Apium graveolens | 1 | Ag9G02739 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G003640, COCNU_01G008490 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103696172 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_05.3488.V1.1, AsparagusV1_07.2860.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri14G27037, Ftri7G16304 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G31410.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10025953m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g29270.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g010470.2N, BniB05g006490.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G2197 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2395 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno03g10090, gene.Cymno06g06570 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate04g11220, gene.Thate05g05860 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1607 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00030604 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G12709 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0101730, gene-QOZ80_6AG0549260 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0560030.1, HORVU.MOREX.r3.7HG0729490.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_007520, gene-QYE76_020559, gene-QYE76_035620 ... |
| Poaceae | Oryza coarctata | 4 | Oco03G002580, Oco04G002520, Oco11G015880, Oco12G016200 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g05710.1, LOC_Os06g47860.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G039700, gene-BS78_10G244500, gene-BS78_K250000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0202710, Pt_Chr0401167 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr02G032370, Chr05G001380, Chr06G034840, Chr10G021120 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel6E01G274500, Tel7E01G721900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG016080, gene_TRIDC6BG021810 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS6A02G121600.1, TraesCS6B02G149900.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb207970_P001, Zm00001eb226240_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-29953, nbis-gene-33725 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g12200, Zma_g14957, Zma_g31050, Zma_g33308 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.3269, evm.TU.LG16.332 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g25190, gene.Posoc03g14810 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1484 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26256 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-8236 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4318 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.804 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001553 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17588 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9680 |
| Salicaceae | Populus euphratica | 1 | populus_peu13077 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132604283 |
| Solanaceae | Solanum chilense | 1 | SOLCI001264800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107007471 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_14252 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1519 |
| Zosteraceae | Zostera marina | 2 | Zosma05g32710.v3.1, Zosma154g00080.v3.1 |