Basic Information
Locus ID:
CQ.Regalona.r1.2BG0013920
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 67538281 | 67543889 | + | CQ.Regalona.r1.2BG0013920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 90,392.25 Da | 53.38 | 74.44 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 33 | 184 | 4.7053E-59 | - |
| CDD | cd14066 | STKc_IRAK | 485 | 744 | 2.73824E-84 | - |
| Pfam | PF00582 | Universal stress protein family | 33 | 173 | 3.8E-10 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 481 | 734 | 3.9E-37 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 33 | 181 | 1.09E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 462 | 740 | 1.35E-66 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 32 | 183 | 1.8E-12 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 552 | 759 | 4.2E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 444 | 551 | 1.4E-25 | - |
| SMART | SM00220 | serkin_6 | 479 | 741 | 1.0E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 479 | 745 | 33.968964 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 597 | 609 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 804 | - | - |
| Coils | Coil | Coil | 345 | 365 | - | - |
| Coils | Coil | Coil | 405 | 460 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021715871.1 | U-box domain-containing protein 35-like [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LZ29 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology