Basic Information
Locus ID:
CQ.Regalona.r1.2BG0011700
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 60072863 | 60075867 | + | CQ.Regalona.r1.2BG0011700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 53,163.63 Da | 39.99 | 97.83 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 46 | 5.7E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 138 | 291 | 7.59E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 68 | 1.57E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 115 | 302 | 8.4E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 50 | 7.1E-8 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 11 | 47 | 9.735919 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22610.2 | - | 0 |
| RefSeq | XP_021714902.1 | FBD-associated F-box protein At5g22730-like [Chenopodium quinoa] | 0 |
| Q9FNK0 | Putative F-box/FBD/LRR-repeat protein At5g22610 OS=Arabidopsis thaliana OX=3702 GN=At5g22610 PE=4 SV=1 | 0 | |
| TrEMBL | A0A803N072 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology