Basic Information
Locus ID:
CQ.Regalona.r1.2BG0011640
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 59951513 | 59954020 | + | CQ.Regalona.r1.2BG0011640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 66,597.24 Da | 41.65 | 100.00 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 12 | 47 | 1.1E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 151 | 324 | 1.45E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 56 | 2.75E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 101 | 387 | 5.5E-13 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 49 | 2.7E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 58 | 9.312009 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18150.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_021740029.1 | uncharacterized protein LOC110706414 isoform X1 [Chenopodium quinoa] | 0 |
| Q9LV26 | Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana OX=3702 GN=At3g18150 PE=4 SV=2 | 0 | |
| TrEMBL | A0A803M4E4 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology