Basic Information
Locus ID:
CQ.Regalona.r1.2BG0010900
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 42488078 | 42504721 | + | CQ.Regalona.r1.2BG0010900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 127,204.03 Da | 42.19 | 70.75 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 884 | 1141 | 3.64876E-113 | - |
| CDD | cd06410 | PB1_UP2 | 179 | 274 | 7.83735E-45 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 880 | 1140 | 6.2E-63 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 192 | 274 | 2.1E-18 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 867 | 1138 | 4.71E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 191 | 280 | 2.43E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 196 | 277 | 1.5E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 966 | 1153 | 2.7E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 871 | 965 | 1.1E-25 | - |
| SMART | SM00220 | serkin_6 | 878 | 1145 | 5.4E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 190 | 277 | 2.6E-32 | IPR000270 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 175 | 277 | 11.257812 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 878 | 1159 | 41.134899 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 884 | 909 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1003 | 1015 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1112 | 1134 | 5.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 997 | 1015 | 5.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 960 | 973 | 5.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1068 | 1090 | 5.5E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 669 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 485 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021730558.1 | uncharacterized protein LOC110697503 [Chenopodium quinoa] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N065 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology