Basic Information
Locus ID:
CQ.Regalona.r1.2BG0009180
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 23916201 | 23920437 | - | CQ.Regalona.r1.2BG0009180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 53,918.32 Da | 39.89 | 89.96 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 360 | 430 | 4.4E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 23 | 342 | 1.9E-85 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 23 | 342 | 1.11E-86 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 22 | 349 | 4.9E-117 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 353 | 453 | 1.2E-10 | - |
| SMART | SM00768 | X8_cls | 359 | 444 | 2.0E-45 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 257 | 270 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021766217.1 | glucan endo-1,3-beta-glucosidase 2-like [Chenopodium quinoa] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803N172 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology