Basic Information
Locus ID:
CQ.Regalona.r1.2BG0006850
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
CSC1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 11593515 | 11612298 | + | CQ.Regalona.r1.2BG0006850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 80,886.65 Da | 45.97 | 112.49 | 0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 188 | 337 | 2.6E-27 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 350 | 615 | 1.4E-72 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 167 | 9.4E-42 | IPR032880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 708 | - | - |
| Coils | Coil | Coil | 269 | 289 | - | - |
| Coils | Coil | Coil | 232 | 252 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_021721434.1 | CSC1-like protein HYP1 [Chenopodium quinoa] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RN22 | CSC1-like protein HYP1 OS=Spinacia oleracea OX=3562 GN=SOVF_052690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology