Basic Information
Locus ID:
CQ.Regalona.r1.2BG0006720
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 10997340 | 11006780 | + | CQ.Regalona.r1.2BG0006720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 17,464.12 Da | 18.33 | 105.06 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 46 | 148 | 5.2E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 144 | 1.19E-35 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 40 | 152 | 5.5E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 39 | 9.5E-8 | - |
| SMART | SM00220 | serkin_6 | 1 | 153 | 8.1E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 154 | 19.340271 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14640.1 | shaggy-like kinase 13. | 0 |
| RefSeq | XP_021836651.1 | shaggy-related protein kinase NtK-1-like [Spinacia oleracea] | 0 |
| P51139 | Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa OX=3879 GN=MSK-3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RJF2 | non-specific serine/threonine protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_059970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg47968 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.2BG0006720 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.2063.V1.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G015720 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107003968, gene-LOC107030055 |