Basic Information
Locus ID:
CQ.Regalona.r1.2BG0001950
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 2388598 | 2391348 | + | CQ.Regalona.r1.2BG0001950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 69,884.76 Da | 33.23 | 93.03 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 74 | 217 | 1.6E-16 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 339 | 587 | 7.6E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 69 | 267 | 2.46E-29 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 332 | 591 | 1.11E-39 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 62 | 222 | 5.4E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 392 | 1.7E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 395 | 608 | 1.1E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 28 | 319 | 14.534713 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 312 | 602 | 19.2272 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021757991.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC110723026 [Chenopodium quinoa] | 0 |
| Q9SVY6 | Non-functional pseudokinase ZRK2 OS=Arabidopsis thaliana OX=3702 GN=ZRK2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0J8BEL4 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_2g044960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah031726 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl54871 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000013396 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.2AG0000610, CQ.Regalona.r1.2BG0001920 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30082680 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0421 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_15_RagTag.538, evm.TU.Scaffold_15_RagTag.541 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26696 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-15826, nbisL1-mrna-15827 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.269 |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00002464, Maker00002536, Maker00002600 |