Basic Information
Locus ID:
CQ.Regalona.r1.2BG0001920
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 2340289 | 2354734 | + | CQ.Regalona.r1.2BG0001920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 152,013.39 Da | 36.67 | 93.48 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 836 | 1018 | 8.9E-15 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 138 | 376 | 1.4E-23 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 461 | 718 | 9.8E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 141 | 392 | 2.35E-39 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 455 | 732 | 6.97E-38 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1172 | 1285 | 1.04E-9 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 812 | 1082 | 7.62E-31 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 731 | 4.7E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 123 | 183 | 4.6E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 397 | 3.6E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 877 | 1088 | 9.2E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1150 | 1287 | 2.4E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 398 | 732 | 19.213066 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 81 | 384 | 21.403835 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 789 | 1076 | 17.149502 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57710.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021757990.1 | uncharacterized protein LOC110723022 [Chenopodium quinoa] | 0 |
| Q9SVY5 | Serine/threonine-protein kinase ZRK1 OS=Arabidopsis thaliana OX=3702 GN=ZRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8BEL4 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_2g044960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah031726 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl54871 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000013396 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.2AG0000610, CQ.Regalona.r1.2BG0001920 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30082680 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0421 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_15_RagTag.538, evm.TU.Scaffold_15_RagTag.541 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26696 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-15826, nbisL1-mrna-15827 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.269 |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00002464, Maker00002536, Maker00002600 |