Basic Information
Locus ID:
CQ.Regalona.r1.2BG0001720
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Concanavalin A-like lectin protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 2040036 | 2042147 | - | CQ.Regalona.r1.2BG0001720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 19,305.90 Da | 31.88 | 86.76 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 18 | 63 | 3.2E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 145 | 5.08E-15 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 5 | 48 | 1.8E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 49 | 171 | 2.5E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76360.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021758707.1 | probable serine/threonine-protein kinase PIX13 [Chenopodium quinoa] | 0 |
| Q8H186 | Probable serine/threonine-protein kinase PBL1 OS=Arabidopsis thaliana OX=3702 GN=PBL1 PE=1 SV=1 | 0 | |
| TrEMBL | M8A3A3 | Putative serine/threonine-protein kinase Cx32, chloroplastic OS=Triticum urartu OX=4572 GN=TRIUR3_03244 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah008998 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2BG0001720, CQ.Regalona.r1.4BG0025380 |