HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.2AG0022920
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
chr2A 59255974 59259381 + CQ.Regalona.r1.2AG0022920
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.90 90,024.31 Da 38.30 82.11 -0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 498 766 9.43E-96 -
CDD cd00028 B_lectin 47 158 1.52051E-20 IPR001480
Pfam PF01453 D-mannose binding lectin 85 168 5.6E-15 IPR001480
Pfam PF00069 Protein kinase domain 496 761 2.0E-49 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 475 764 8.5E-78 IPR011009
SUPERFAMILY SSF51110 alpha-D-mannose-specific plant lectins 84 209 1.01E-19 IPR036426
Gene3D G3DSA:2.90.10.10 - 47 156 9.3E-15 IPR036426
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 461 566 2.0E-31 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 567 771 1.2E-61 -
SMART SM00108 blect_4 45 158 5.0E-20 IPR001480
SMART SM00220 serkin_6 492 763 1.6E-33 IPR000719
PIRSF PIRSF000641 SRK 6 815 3.8E-199 IPR024171
ProSiteProfiles PS50927 Bulb-type lectin domain profile. 39 155 13.16956 IPR001480
ProSiteProfiles PS50011 Protein kinase domain profile. 492 766 36.894699 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 614 626 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 498 521 - IPR017441
MobiDBLite mobidb-lite consensus disorder prediction 794 814 - -
MobiDBLite mobidb-lite consensus disorder prediction 794 821 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0004674 (protein serine/threonine kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G32300.1 S-domain-2 5. 0
RefSeq XP_021738535.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Chenopodium quinoa] 0
Swiss-Prot Q8RWZ5 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 0
TrEMBL A0A7C9E106 Receptor-like serine/threonine-protein kinase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg36590, jg4619
Aizoaceae Mesembryanthemum crystallinum 2 gene_25178, gene_25180
Amaranthaceae Atriplex hortensis 2 Ah010571, Ah034697
Amaranthaceae Beta vulgaris 2 BVRB_2g030270, BVRB_2g030280
Amaranthaceae Salicornia bigelovii 4 Sbi_jg21815, Sbi_jg21817, Sbi_jg29471, Sbi_jg29472
Amaranthaceae Salicornia europaea 2 Seu_jg15931, Seu_jg15932
Amaranthaceae Suaeda aralocaspica 4 GOSA_00005171, GOSA_00005172, GOSA_00008551, GOSA_00008552
Amaranthaceae Suaeda glauca 8 Sgl55923, Sgl61929, Sgl63227, Sgl63228, Sgl63362, Sgl63363 ...
Sgl67839, Sgl67840
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000016950, gene:ENSEOMG00000050154 ...
gene:ENSEOMG00000050611
Amaranthaceae Chenopodium quinoa 6 CQ.Regalona.r1.1BG0021250, CQ.Regalona.r1.1BG0021260 ...
CQ.Regalona.r1.2AG0022920, CQ.Regalona.r1.2AG0022930, CQ.Regalona.r1.7BG0009880, CQ.Regalona.r1.9AG0014750
Anacardiaceae Pistacia vera 3 pistato.v30128210, pistato.v30128230, pistato.v30250080
Apiaceae Apium graveolens 4 Ag11G04428, Ag3G00508, Ag6G02488, Ag7G01957
Arecaceae Cocos nucifera 1 scaffold102186G000010
Arecaceae Phoenix dactylifera 1 gene-LOC120111958
Asparagaceae Asparagus officinalis 2 AsparagusV1_01.2484.V1.1, AsparagusV1_01.2486.V1.1
Asteraceae Flaveria trinervia 2 Ftri16G05763, Ftri16G06898
Brassicaceae Arabidopsis thaliana 1 AT4G32300.1
Brassicaceae Eutrema salsugineum 1 Thhalv10024411m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp7g30070.v2.2
Brassicaceae Brassica nigra 5 BniB02g085810.2N, BniB03g010020.2N, BniB05g005760.2N ...
BniB05g005780.2N, BniB05g005790.2N
Casuarinaceae Casuarina equisetifolia 4 Ceq02G0310, Ceq02G0313, Ceq02G0314, Ceq04G2345
Casuarinaceae Casuarina glauca 4 Cgl02G0322, Cgl02G0324, Cgl02G0325, Cgl04G2550
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno01g13590, gene.Cymno06g01850
Hydrocharitaceae Thalassia testudinum 2 gene.Thate02g32480, gene.Thate06g14950
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-296, nbisL1-mrna-4498
Nitrariaceae Nitraria sibirica 3 evm.TU.LG01.479, evm.TU.LG01.480, evm.TU.LG07.1450
Plantaginaceae Plantago ovata 4 Pov_00013308, Pov_00013322, Pov_00013341, Pov_00013351
Plumbaginaceae Limonium bicolor 4 Lb0G37072, Lb0G37859, Lb0G37860, Lb3G18277
Poaceae Echinochloa crus-galli 3 AH06.1437, BH06.1443, CH06.1600
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_6AG0519810, gene-QOZ80_6BG0472010
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.3HG0233690.1 ...
HORVU.MOREX.r3.7HG0676380.1.CDS1
Poaceae Lolium multiflorum 1 gene-QYE76_029684
Poaceae Oryza coarctata 2 Oco11G008660, Oco12G008650
Poaceae Oryza sativa 1 LOC_Os06g29810.2
Poaceae Paspalum vaginatum 1 gene-BS78_06G117000
Poaceae Puccinellia tenuiflora 1 Pt_Chr0403910
Poaceae Sporobolus alterniflorus 4 Chr10G002270, Chr11G016380, Chr14G005760, Chr21G006270
Poaceae Thinopyrum elongatum 3 Tel3E01G161700, Tel3E01G778400, Tel7E01G415100
Poaceae Triticum dicoccoides 4 gene_TRIDC3AG011020, gene_TRIDC3BG014880 ...
gene_TRIDC7AG029680, gene_TRIDC7BG020420
Poaceae Triticum aestivum 6 TraesCS3A02G091800.1, TraesCS3B02G107000.1 ...
TraesCS3D02G480200.1, TraesCS7A02G230900.1.cds1, TraesCS7B02G196400.2.cds1, TraesCS7D02G231000.1.cds1
Poaceae Zea mays 1 Zm00001eb382120_P001
Poaceae Zoysia japonica 3 nbis-gene-28870, nbis-gene-43765, nbis-gene-55176
Poaceae Zoysia macrostachya 2 Zma_g29644, Zma_g31854
Portulacaceae Portulaca oleracea 2 evm.TU.LG04.1781, evm.TU.LG06.593
Posidoniaceae Posidonia oceanica 1 gene.Posoc03g25420
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_4_RagTag.1271
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-27144, nbisL1-mrna-27328
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-20473
Rhizophoraceae Kandelia candel 1 add.evm.TU.utg000008l.297
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-20635, nbisL1-mrna-20636
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-978
Salicaceae Populus euphratica 1 populus_peu12900
Solanaceae Lycium barbarum 1 gene-LOC132636203
Solanaceae Solanum chilense 1 SOLCI001146000
Solanaceae Solanum pennellii 1 gene-LOC107026740
Tamaricaceae Reaumuria soongarica 3 STRG.19219_chr07_-, STRG.944_chr01_-, gene_10939
Tamaricaceae Tamarix chinensis 4 TC01G1512, TC02G0509, TC08G2198, TC08G2202
Zosteraceae Zostera marina 1 Zosma05g28640.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.