Basic Information
Locus ID:
CQ.Regalona.r1.2AG0021610
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 57706515 | 57709357 | - | CQ.Regalona.r1.2AG0021610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 85,727.34 Da | 39.41 | 86.16 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 493 | 774 | 1.1E-42 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 160 | 185 | 6.1E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 471 | 777 | 2.02E-71 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 26 | 271 | 6.54E-20 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 790 | 1.5E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 455 | 572 | 6.8E-32 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 157 | 369 | 6.6E-23 | IPR009091 |
| SMART | SM00220 | serkin_6 | 492 | 781 | 1.1E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 492 | 781 | 36.329338 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 623 | 635 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 498 | 520 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 474 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_021732474.1 | putative serine/threonine-protein kinase-like protein CCR3 [Chenopodium quinoa] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M3T7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology