Basic Information
Locus ID:
CQ.Regalona.r1.2AG0021020
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 57008484 | 57019849 | + | CQ.Regalona.r1.2AG0021020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 98,880.62 Da | 35.30 | 104.20 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 641 | 799 | 1.6E-32 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 137 | 196 | 9.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 306 | 430 | 4.35E-13 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 623 | 866 | 4.05E-56 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 321 | 2.72E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 426 | 7.0E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 615 | 715 | 3.4E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 50 | 205 | 1.5E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 716 | 815 | 5.3E-26 | - |
| SMART | SM00220 | serkin_6 | 640 | 864 | 4.9E-14 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 640 | 895 | 27.665197 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 760 | 772 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 646 | 668 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_048495568.1 | leucine-rich repeat receptor protein kinase HPCA1 isoform X5 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M3M9 | LRRNT_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology