Basic Information
Locus ID:
CQ.Regalona.r1.2AG0018300
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
RECEPTOR-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 54120489 | 54122957 | - | CQ.Regalona.r1.2AG0018300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 75,826.49 Da | 40.19 | 90.92 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 91 | 346 | 1.9E-15 | IPR024788 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 545 | 594 | 5.5E-6 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 454 | 530 | 3.4E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 422 | 652 | 1.54E-40 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 523 | 657 | 4.1E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 434 | 522 | 2.7E-32 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 152 | 337 | 7.6E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 449 | 686 | 11.368696 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 455 | 478 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021839061.1 | receptor-like protein kinase FERONIA [Spinacia oleracea] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QKR5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_168200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for CQ.Regalona.r1.2AG0018300.