Basic Information
Locus ID:
CQ.Regalona.r1.2AG0015050
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 50255731 | 50259416 | - | CQ.Regalona.r1.2AG0015050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 108,230.31 Da | 34.03 | 100.57 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 697 | 972 | 5.37444E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 692 | 969 | 7.1E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 119 | 141 | 0.68 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 5.3E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 524 | 562 | 5.7E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 217 | 239 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 202 | 6.9E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 288 | 596 | 9.42E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 971 | 1.48E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 384 | 2.35E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 205 | 1.1E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 142 | 4.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 286 | 8.7E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 972 | 1.9E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 456 | 637 | 1.2E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 455 | 8.2E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 674 | 765 | 4.8E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 573 | 7.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 7.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 140.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 93 | 112 | 34.0 | - |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 38.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 477 | 506 | 460.0 | - |
| SMART | SM00220 | serkin_6 | 691 | 971 | 1.5E-29 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 310 | 336 | 300.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 263 | 289 | 0.0083 | - |
| SMART | SM00365 | LRR_sd22_2 | 239 | 262 | 180.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 972 | 37.629669 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 527 | 550 | 7.380825 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 720 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021776425.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N4B0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology