Basic Information
Locus ID:
CQ.Regalona.r1.2AG0015040
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 50248233 | 50252056 | - | CQ.Regalona.r1.2AG0015040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 107,363.88 Da | 37.50 | 101.28 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 642 | 923 | 1.44283E-87 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 217 | 238 | 0.36 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 637 | 919 | 1.6E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 476 | 534 | 1.2E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 240 | 298 | 2.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 95 | 154 | 1.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 24 | 81 | 1.6E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 315 | 555 | 2.21E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 623 | 921 | 2.43E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 24 | 300 | 1.02E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 322 | 572 | 1.2E-57 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 159 | 314 | 2.6E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 93 | 6.6E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 624 | 715 | 4.6E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 94 | 158 | 2.3E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 716 | 930 | 6.6E-59 | - |
| SMART | SM00365 | LRR_sd22_2 | 45 | 71 | 170.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 167 | 193 | 140.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 215 | 241 | 57.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 118 | 147 | 210.0 | - |
| SMART | SM00369 | LRR_typ_2 | 262 | 286 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 498 | 522 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 45 | 69 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 636 | 927 | 2.7E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 142 | 166 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 450 | 474 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 5.7 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 476 | 498 | 7.54254 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 636 | 927 | 38.011284 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 772 | 784 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 642 | 665 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021776424.1 | LOW QUALITY PROTEIN: receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N4A9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology