Basic Information
Locus ID:
CQ.Regalona.r1.2AG0015020
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 50229608 | 50232692 | - | CQ.Regalona.r1.2AG0015020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 110,603.27 Da | 37.15 | 101.21 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 272 | 331 | 3.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 127 | 186 | 2.2E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 16 | 50 | 1.3E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 675 | 955 | 1.7E-48 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 363 | 1.22E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 653 | 958 | 1.48E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 287 | 617 | 3.84E-46 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 753 | 978 | 9.4E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 436 | 3.1E-66 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 14 | 189 | 5.8E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 437 | 623 | 1.3E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 655 | 752 | 2.9E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 77 | 101 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 532 | 556 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 198 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 318 | 342 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 317 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 127 | 150 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 272 | 293 | 240.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 673 | 961 | 4.7E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 223 | 247 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 673 | 968 | 37.21978 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 510 | 532 | 7.088198 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 809 | 821 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021776421.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N4A7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology