Basic Information
Locus ID:
CQ.Regalona.r1.2AG0014040
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 48554136 | 48564679 | + | CQ.Regalona.r1.2AG0014040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 69,196.01 Da | 34.05 | 94.59 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 158 | 190 | 6.54389E-4 | IPR018392 |
| CDD | cd00118 | LysM | 33 | 77 | 2.95269E-6 | IPR018392 |
| Pfam | PF01476 | LysM domain | 163 | 188 | 0.043 | IPR018392 |
| Pfam | PF01476 | LysM domain | 34 | 76 | 1.4E-5 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 306 | 602 | 1.7E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 604 | 3.51E-74 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 33 | 78 | 1.83E-7 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 276 | 374 | 1.7E-27 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 27 | 87 | 8.6E-11 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 411 | 619 | 2.9E-53 | - |
| SMART | SM00220 | serkin_6 | 304 | 606 | 2.3E-26 | IPR000719 |
| SMART | SM00257 | LysM_2 | 159 | 201 | 2.4 | IPR018392 |
| SMART | SM00257 | LysM_2 | 33 | 78 | 7.5E-6 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 304 | 612 | 37.71447 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 32 | 77 | 11.577937 | IPR018392 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 451 | 463 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 310 | 332 | - | IPR017441 |
| ProSitePatterns | PS00430 | TonB-dependent receptor proteins signature 1. | 1 | 47 | - | IPR010916 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021763736.1 | chitin elicitor receptor kinase 1-like [Chenopodium quinoa] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N1Y9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology