Basic Information
Locus ID:
CQ.Regalona.r1.2AG0013000
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 46184528 | 46191454 | - | CQ.Regalona.r1.2AG0013000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 30,429.03 Da | 49.97 | 81.50 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain | 28 | 103 | 5.2E-10 | IPR044822 |
| SUPERFAMILY | SSF46689 | Homeodomain-like | 26 | 95 | 2.45E-5 | IPR009057 |
| Gene3D | G3DSA:1.10.10.60 | - | 29 | 89 | 5.2E-10 | - |
| ProSiteProfiles | PS50090 | Myb-like domain profile. | 29 | 85 | 7.026909 | IPR001005 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 184 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31270.1 | sequence-specific DNA binding transcription factors. | 0 |
| RefSeq | XP_021744351.1 | uncharacterized protein LOC110710370 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803LYU8 | Myb-like domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg7771 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8016 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034277 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g035290 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg20594, Sbi_jg23167 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17011 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009175 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl63461, Sgl67940, Sgl67960 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000018624, gene:ENSEOMG00000019360 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0013000, CQ.Regalona.r1.2BG0014890 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30252340 |
| Apiaceae | Apium graveolens | 1 | Ag7G00202 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G007720, COCNU_11G009850 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103701445 |
| Asparagaceae | Asparagus officinalis | 5 | AsparagusV1_01.2741.V1.1, AsparagusV1_01.2742.V1.1 ... |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G14008 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G31270.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10025787m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g29130.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g010570.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G2151 |
| Casuarinaceae | Casuarina glauca | 1 | CglSG0059 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g08710 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g30140 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1635 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028693 |
| Poaceae | Echinochloa crus-galli | 4 | AH07.527, BH07.653, BH08.1553, CH07.531 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0103220, gene-QOZ80_2BG0156530 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0570820.1 |
| Poaceae | Oryza coarctata | 2 | Oco03G003670, Oco04G003600 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g07800.1, LOC_Os03g49890.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G054600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0202386, Pt_Chr0202395 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr06G034240, Chr15G025500 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G317700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG021690, gene_TRIDC6BG027390 |
| Poaceae | Triticum aestivum | 4 | TraesCS6A02G155000.1, TraesCS6B02G183000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb233350_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-33632, nbis-gene-56664 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g15031 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.3501, evm.TU.LG16.81 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g20910 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.1001 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-13487 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10862 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-9237 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000004l.267 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004220 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3674 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7700 |
| Salicaceae | Populus euphratica | 2 | populus_peu04556, populus_peu13112 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132635591 |
| Solanaceae | Solanum chilense | 1 | SOLCI007399600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107027126 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1846 |