Basic Information
Locus ID:
CQ.Regalona.r1.2AG0012980
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 46175866 | 46180133 | - | CQ.Regalona.r1.2AG0012980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 74,083.46 Da | 34.28 | 91.11 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 347 | 612 | 8.1E-31 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 74 | 3.4E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 125 | 185 | 1.9E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 347 | 621 | 3.32E-48 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 234 | 2.72E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 195 | 1.5E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 237 | 9.6E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 419 | 631 | 8.6E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 418 | 2.0E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 343 | 617 | 27.015034 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 657 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 632 | 657 | - | - |
| Coils | Coil | Coil | 600 | 620 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021731529.1 | pollen receptor-like kinase 4 [Chenopodium quinoa] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803NCK5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology