Basic Information
Locus ID:
CQ.Regalona.r1.2AG0012950
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 46089601 | 46096595 | - | CQ.Regalona.r1.2AG0012950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 87,136.44 Da | 51.80 | 76.44 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 156 | 5.92067E-60 | - |
| Pfam | PF00069 | Protein kinase domain | 457 | 710 | 3.5E-42 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 18 | 128 | 2.1E-8 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 434 | 716 | 8.23E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 143 | 2.01E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 530 | 734 | 1.6E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 423 | 529 | 4.5E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 154 | 1.6E-10 | IPR014729 |
| SMART | SM00220 | serkin_6 | 457 | 720 | 5.9E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 457 | 723 | 36.696823 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 575 | 587 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 746 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 208 | - | - |
| Coils | Coil | Coil | 323 | 343 | - | - |
| Coils | Coil | Coil | 349 | 369 | - | - |
| Coils | Coil | Coil | 393 | 413 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021744193.1 | U-box domain-containing protein 52-like [Chenopodium quinoa] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LYV6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology